Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Snf8Q9CZ28 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.47■□□□□ 0.71
Snf8Q9CZ28 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Snf8Q9CZ28 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.46■□□□□ 0.7
Snf8Q9CZ28 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Snf8Q9CZ28 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snf8Q9CZ28 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snf8Q9CZ28 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms