Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lrrc40Q9CRC8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.84■□□□□ 0.61
Lrrc40Q9CRC8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrrc40Q9CRC8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrrc40Q9CRC8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrrc40Q9CRC8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lrrc40Q9CRC8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrrc40Q9CRC8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrrc40Q9CRC8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lrrc40Q9CRC8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Gm7860-201ENSMUST00000121190 879 ntBASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lrrc40Q9CRC8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrrc40Q9CRC8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrrc40Q9CRC8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrrc40Q9CRC8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrrc40Q9CRC8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrrc40Q9CRC8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms