Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc43Q9CR29 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Gm11421-201ENSMUST00000122124 294 ntBASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Serp2-204ENSMUST00000228055 705 ntBASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc43Q9CR29 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.02■□□□□ 0.95
Ccdc43Q9CR29 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc43Q9CR29 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc43Q9CR29 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc43Q9CR29 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Gm43173-201ENSMUST00000202246 593 ntBASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc43Q9CR29 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc43Q9CR29 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Smad6-203ENSMUST00000179458 273 ntBASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Gm6139-201ENSMUST00000079261 882 ntBASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc43Q9CR29 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Gm43017-201ENSMUST00000198296 752 ntBASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc43Q9CR29 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms