Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldnd1Q9CQX5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Gm13158-201ENSMUST00000122007 736 ntBASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldnd1Q9CQX5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cldnd1Q9CQX5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldnd1Q9CQX5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cldnd1Q9CQX5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldnd1Q9CQX5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldnd1Q9CQX5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldnd1Q9CQX5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldnd1Q9CQX5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldnd1Q9CQX5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldnd1Q9CQX5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cldnd1Q9CQX5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldnd1Q9CQX5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.49■□□□□ 0.71
Cldnd1Q9CQX5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldnd1Q9CQX5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldnd1Q9CQX5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldnd1Q9CQX5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldnd1Q9CQX5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cldnd1Q9CQX5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldnd1Q9CQX5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cldnd1Q9CQX5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cldnd1Q9CQX5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.47■□□□□ 0.71
Cldnd1Q9CQX5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.47■□□□□ 0.71
Cldnd1Q9CQX5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldnd1Q9CQX5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldnd1Q9CQX5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldnd1Q9CQX5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldnd1Q9CQX5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.46■□□□□ 0.71
Cldnd1Q9CQX5 Mir5122-201ENSMUST00000175004 89 ntBASIC19.46■□□□□ 0.71
Cldnd1Q9CQX5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldnd1Q9CQX5 Gm5417-201ENSMUST00000079706 384 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms