Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chchd1Q9CQA6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chchd1Q9CQA6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chchd1Q9CQA6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chchd1Q9CQA6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chchd1Q9CQA6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chchd1Q9CQA6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms