Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt88Q9CPR6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt88Q9CPR6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Krt88Q9CPR6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt88Q9CPR6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Krt88Q9CPR6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.12■□□□□ 0.33
Krt88Q9CPR6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.11■□□□□ 0.33
Krt88Q9CPR6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.11■□□□□ 0.33
Krt88Q9CPR6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.1■□□□□ 0.33
Krt88Q9CPR6 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.1■□□□□ 0.33
Krt88Q9CPR6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Krt88Q9CPR6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Krt88Q9CPR6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt88Q9CPR6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Krt88Q9CPR6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt88Q9CPR6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt88Q9CPR6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt88Q9CPR6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt88Q9CPR6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Krt88Q9CPR6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt88Q9CPR6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Krt88Q9CPR6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt88Q9CPR6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt88Q9CPR6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt88Q9CPR6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt88Q9CPR6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt88Q9CPR6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Krt88Q9CPR6 Gm15546-201ENSMUST00000122095 826 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms