Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.35■□□□□ 0.85
Tlr3Q99MB1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Tlr3Q99MB1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Tlr3Q99MB1 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.34■□□□□ 0.85
Tlr3Q99MB1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tlr3Q99MB1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.33■□□□□ 0.85
Tlr3Q99MB1 Gm18671-201ENSMUST00000214826 683 ntBASIC20.33■□□□□ 0.85
Tlr3Q99MB1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tlr3Q99MB1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tlr3Q99MB1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tlr3Q99MB1 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.33■□□□□ 0.84
Tlr3Q99MB1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tlr3Q99MB1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tlr3Q99MB1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tlr3Q99MB1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tlr3Q99MB1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tlr3Q99MB1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tlr3Q99MB1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tlr3Q99MB1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tlr3Q99MB1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tlr3Q99MB1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Tlr3Q99MB1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Gm10849-201ENSMUST00000100397 618 ntBASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tlr3Q99MB1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Gm38205-201ENSMUST00000192243 258 ntBASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Gm37179-201ENSMUST00000194862 823 ntBASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Tlr3Q99MB1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms