Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm15565-201ENSMUST00000118890 427 ntBASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cstf1Q99LC2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cstf1Q99LC2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cstf1Q99LC2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 AA386476-201ENSMUST00000098781 1665 ntBASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cstf1Q99LC2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf1Q99LC2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf1Q99LC2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf1Q99LC2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf1Q99LC2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf1Q99LC2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf1Q99LC2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cstf1Q99LC2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cstf1Q99LC2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cstf1Q99LC2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cstf1Q99LC2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cstf1Q99LC2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms