Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Serp2-204ENSMUST00000228055 705 ntBASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Thumpd1Q99J36 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Thumpd1Q99J36 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Thumpd1Q99J36 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Thumpd1Q99J36 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Thumpd1Q99J36 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Thumpd1Q99J36 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Grk6-206ENSMUST00000224995 2971 ntBASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.87■□□□□ 0.29
Thumpd1Q99J36 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Thumpd1Q99J36 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Thumpd1Q99J36 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd1Q99J36 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd1Q99J36 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.84■□□□□ 0.29
Thumpd1Q99J36 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd1Q99J36 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Thumpd1Q99J36 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Thumpd1Q99J36 Gm15820-201ENSMUST00000201566 728 ntBASIC16.84■□□□□ 0.29
Thumpd1Q99J36 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms