Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Golph3-205ENSMUST00000228671 2842 ntBASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha3Q91Y16 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Gm42642-201ENSMUST00000200683 355 ntBASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha3Q91Y16 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Gm18671-201ENSMUST00000214826 683 ntBASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha3Q91Y16 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha3Q91Y16 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdha3Q91Y16 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Pcdha3Q91Y16 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha3Q91Y16 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha3Q91Y16 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha3Q91Y16 BC021767-201ENSMUST00000126387 1716 ntBASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha3Q91Y16 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms