Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb1Q91Y08 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb1Q91Y08 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb1Q91Y08 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb1Q91Y08 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Golph3-205ENSMUST00000228671 2842 ntBASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb1Q91Y08 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb1Q91Y08 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb1Q91Y08 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb1Q91Y08 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb1Q91Y08 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb1Q91Y08 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb1Q91Y08 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.69■□□□□ 0.74
Pcdhb1Q91Y08 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb1Q91Y08 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb1Q91Y08 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms