Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga6Q91XY2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga6Q91XY2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga6Q91XY2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga6Q91XY2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga6Q91XY2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga6Q91XY2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhga6Q91XY2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhga6Q91XY2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhga6Q91XY2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhga6Q91XY2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.7■□□□□ 0.58
Pcdhga6Q91XY2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms