Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Gm38205-201ENSMUST00000192243 258 ntBASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Gm6365-201ENSMUST00000054711 744 ntBASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgc5Q91XW9 Gm13146-201ENSMUST00000118508 780 ntBASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Gm8520-201ENSMUST00000186517 868 ntBASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc5Q91XW9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 Gm6420-201ENSMUST00000193885 723 ntBASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc5Q91XW9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Mir7071-201ENSMUST00000184847 69 ntBASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc5Q91XW9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgc5Q91XW9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgc5Q91XW9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgc5Q91XW9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgc5Q91XW9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc5Q91XW9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Gm13168-201ENSMUST00000121771 632 ntBASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc5Q91XW9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Gm20049-201ENSMUST00000219950 730 ntBASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhgc5Q91XW9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.54■■□□□ 1.04
Pcdhgc5Q91XW9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgc5Q91XW9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhgc5Q91XW9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgc5Q91XW9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms