Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vsx1Q91V10 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vsx1Q91V10 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vsx1Q91V10 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Vsx1Q91V10 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vsx1Q91V10 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Vsx1Q91V10 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Gm15565-201ENSMUST00000118890 427 ntBASIC18.76■□□□□ 0.59
Vsx1Q91V10 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vsx1Q91V10 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Vsx1Q91V10 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vsx1Q91V10 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vsx1Q91V10 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vsx1Q91V10 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.71■□□□□ 0.59
Vsx1Q91V10 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vsx1Q91V10 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms