Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC007375.3-201ENST00000600936 2314 ntBASIC23.16■■□□□ 1.3
LMO3Q8TAP4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LMO3Q8TAP4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LMO3Q8TAP4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LMO3Q8TAP4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 TSPY26P-201ENST00000476365 1326 ntBASIC23.15■■□□□ 1.3
LMO3Q8TAP4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.15■■□□□ 1.3
LMO3Q8TAP4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LMO3Q8TAP4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.3
LMO3Q8TAP4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.14■■□□□ 1.3
LMO3Q8TAP4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
LMO3Q8TAP4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LMO3Q8TAP4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.14■■□□□ 1.29
LMO3Q8TAP4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LMO3Q8TAP4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.14■■□□□ 1.29
LMO3Q8TAP4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LMO3Q8TAP4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LMO3Q8TAP4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.13■■□□□ 1.29
LMO3Q8TAP4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.12■■□□□ 1.29
LMO3Q8TAP4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LMO3Q8TAP4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LMO3Q8TAP4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.12■■□□□ 1.29
LMO3Q8TAP4 AC244015.2-201ENST00000616358 1861 ntBASIC23.12■■□□□ 1.29
LMO3Q8TAP4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LMO3Q8TAP4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LMO3Q8TAP4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 AL034346.1-201ENST00000568244 1277 ntBASIC23.11■■□□□ 1.29
LMO3Q8TAP4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LMO3Q8TAP4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LMO3Q8TAP4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LMO3Q8TAP4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.1■■□□□ 1.29
LMO3Q8TAP4 MIR572-201ENST00000384983 95 ntBASIC23.1■■□□□ 1.29
LMO3Q8TAP4 AC005837.3-201ENST00000612163 286 ntBASIC23.1■■□□□ 1.29
LMO3Q8TAP4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LMO3Q8TAP4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 AC026310.3-201ENST00000625186 2373 ntBASIC23.09■■□□□ 1.29
LMO3Q8TAP4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
LMO3Q8TAP4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LMO3Q8TAP4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.08■■□□□ 1.29
LMO3Q8TAP4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.08■■□□□ 1.29
LMO3Q8TAP4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.08■■□□□ 1.29
LMO3Q8TAP4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.08■■□□□ 1.29
LMO3Q8TAP4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LMO3Q8TAP4 AC003102.1-202ENST00000563394 1796 ntBASIC23.08■■□□□ 1.29
LMO3Q8TAP4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LMO3Q8TAP4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
LMO3Q8TAP4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
LMO3Q8TAP4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LMO3Q8TAP4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 MIR638-201ENST00000385237 100 ntBASIC23.07■■□□□ 1.28
LMO3Q8TAP4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 AP006587.3-201ENST00000525742 1516 ntBASIC23.07■■□□□ 1.28
LMO3Q8TAP4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
LMO3Q8TAP4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.06■■□□□ 1.28
LMO3Q8TAP4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms