Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Gm11421-201ENSMUST00000122124 294 ntBASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps39Q8R5L3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Smad6-203ENSMUST00000179458 273 ntBASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Gm8493-201ENSMUST00000196881 489 ntBASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps39Q8R5L3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps39Q8R5L3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps39Q8R5L3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps39Q8R5L3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps39Q8R5L3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.93■□□□□ 0.62
Vps39Q8R5L3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps39Q8R5L3 BC021767-201ENSMUST00000126387 1716 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms