Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Chmp7Q8R1T1 Gm27275-201ENSMUST00000184318 272 ntBASIC24.39■■□□□ 1.49
Chmp7Q8R1T1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Chmp7Q8R1T1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Chmp7Q8R1T1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Chmp7Q8R1T1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chmp7Q8R1T1 Gm12896-201ENSMUST00000118430 226 ntBASIC24.37■■□□□ 1.49
Chmp7Q8R1T1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chmp7Q8R1T1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC24.37■■□□□ 1.49
Chmp7Q8R1T1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chmp7Q8R1T1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chmp7Q8R1T1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chmp7Q8R1T1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chmp7Q8R1T1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Chmp7Q8R1T1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Chmp7Q8R1T1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chmp7Q8R1T1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Chmp7Q8R1T1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Chmp7Q8R1T1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chmp7Q8R1T1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC24.34■■□□□ 1.49
Chmp7Q8R1T1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Chmp7Q8R1T1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Chmp7Q8R1T1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chmp7Q8R1T1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Chmp7Q8R1T1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Chmp7Q8R1T1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Chmp7Q8R1T1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Chmp7Q8R1T1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Chmp7Q8R1T1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Chmp7Q8R1T1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Chmp7Q8R1T1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Gm2559-201ENSMUST00000201323 363 ntBASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chmp7Q8R1T1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chmp7Q8R1T1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Chmp7Q8R1T1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms