Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sf3a1Q8K4Z5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sf3a1Q8K4Z5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sf3a1Q8K4Z5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sf3a1Q8K4Z5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sf3a1Q8K4Z5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sf3a1Q8K4Z5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.18■■□□□ 1.3
Sf3a1Q8K4Z5 Gm18671-201ENSMUST00000214826 683 ntBASIC23.18■■□□□ 1.3
Sf3a1Q8K4Z5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sf3a1Q8K4Z5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sf3a1Q8K4Z5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sf3a1Q8K4Z5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Sf3a1Q8K4Z5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sf3a1Q8K4Z5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sf3a1Q8K4Z5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sf3a1Q8K4Z5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sf3a1Q8K4Z5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sf3a1Q8K4Z5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sf3a1Q8K4Z5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sf3a1Q8K4Z5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sf3a1Q8K4Z5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
Sf3a1Q8K4Z5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sf3a1Q8K4Z5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sf3a1Q8K4Z5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sf3a1Q8K4Z5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sf3a1Q8K4Z5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Gm10849-201ENSMUST00000100397 618 ntBASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 AC124603.1-201ENSMUST00000223843 308 ntBASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Sf3a1Q8K4Z5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sf3a1Q8K4Z5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sf3a1Q8K4Z5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 AV356131-201ENSMUST00000206201 750 ntBASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sf3a1Q8K4Z5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sf3a1Q8K4Z5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
Sf3a1Q8K4Z5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sf3a1Q8K4Z5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sf3a1Q8K4Z5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms