Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Neil1Q8K4Q6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Neil1Q8K4Q6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Neil1Q8K4Q6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Neil1Q8K4Q6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Neil1Q8K4Q6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Neil1Q8K4Q6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Neil1Q8K4Q6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Neil1Q8K4Q6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Neil1Q8K4Q6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Gm45417-201ENSMUST00000209533 758 ntBASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Neil1Q8K4Q6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Neil1Q8K4Q6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Neil1Q8K4Q6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Neil1Q8K4Q6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Neil1Q8K4Q6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Neil1Q8K4Q6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Neil1Q8K4Q6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Neil1Q8K4Q6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Neil1Q8K4Q6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Neil1Q8K4Q6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Neil1Q8K4Q6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Neil1Q8K4Q6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms