Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn4rl1Q8K0S5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm10698-201ENSMUST00000182663 604 ntBASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtn4rl1Q8K0S5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.29■□□□□ 0.68
Rtn4rl1Q8K0S5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.29■□□□□ 0.68
Rtn4rl1Q8K0S5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rl1Q8K0S5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rl1Q8K0S5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rl1Q8K0S5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn4rl1Q8K0S5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm715-201ENSMUST00000117865 831 ntBASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4rl1Q8K0S5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rtn4rl1Q8K0S5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn4rl1Q8K0S5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Rtn4rl1Q8K0S5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4rl1Q8K0S5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm18666-201ENSMUST00000190039 958 ntBASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4rl1Q8K0S5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms