Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Hmgcs1Q8JZK9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmgcs1Q8JZK9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Hmgcs1Q8JZK9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmgcs1Q8JZK9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgcs1Q8JZK9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgcs1Q8JZK9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgcs1Q8JZK9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Hmgcs1Q8JZK9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Hmgcs1Q8JZK9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgcs1Q8JZK9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgcs1Q8JZK9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Smad6-203ENSMUST00000179458 273 ntBASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgcs1Q8JZK9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgcs1Q8JZK9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Gm43173-201ENSMUST00000202246 593 ntBASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgcs1Q8JZK9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.02■□□□□ 0.47
Hmgcs1Q8JZK9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgcs1Q8JZK9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgcs1Q8JZK9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.01■□□□□ 0.47
Hmgcs1Q8JZK9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms