Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim32Q8CH72 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim32Q8CH72 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim32Q8CH72 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim32Q8CH72 Dio3-201ENSMUST00000097228 1449 ntBASIC21.33■■□□□ 1.01
Trim32Q8CH72 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim32Q8CH72 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Trim32Q8CH72 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.33■■□□□ 1.01
Trim32Q8CH72 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.33■■□□□ 1.01
Trim32Q8CH72 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim32Q8CH72 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim32Q8CH72 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim32Q8CH72 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Trim32Q8CH72 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.33■■□□□ 1
Trim32Q8CH72 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trim32Q8CH72 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.32■■□□□ 1
Trim32Q8CH72 Gm2559-201ENSMUST00000201323 363 ntBASIC21.32■■□□□ 1
Trim32Q8CH72 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Trim32Q8CH72 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trim32Q8CH72 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Trim32Q8CH72 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.32■■□□□ 1
Trim32Q8CH72 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim32Q8CH72 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Trim32Q8CH72 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Trim32Q8CH72 Gm715-201ENSMUST00000117865 831 ntBASIC21.31■■□□□ 1
Trim32Q8CH72 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Trim32Q8CH72 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Trim32Q8CH72 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Trim32Q8CH72 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim32Q8CH72 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim32Q8CH72 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim32Q8CH72 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim32Q8CH72 Gm6576-201ENSMUST00000169678 883 ntBASIC21.3■■□□□ 1
Trim32Q8CH72 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.3■■□□□ 1
Trim32Q8CH72 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.3■■□□□ 1
Trim32Q8CH72 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim32Q8CH72 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim32Q8CH72 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim32Q8CH72 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim32Q8CH72 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Trim32Q8CH72 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.29■■□□□ 1
Trim32Q8CH72 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trim32Q8CH72 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Trim32Q8CH72 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Trim32Q8CH72 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim32Q8CH72 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim32Q8CH72 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.28■■□□□ 1
Trim32Q8CH72 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.28■■□□□ 1
Trim32Q8CH72 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trim32Q8CH72 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Trim32Q8CH72 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim32Q8CH72 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim32Q8CH72 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.28■■□□□ 1
Trim32Q8CH72 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.28■■□□□ 1
Trim32Q8CH72 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.28■■□□□ 1
Trim32Q8CH72 Gm11249-201ENSMUST00000117071 859 ntBASIC21.28■■□□□ 1
Trim32Q8CH72 Gm10698-201ENSMUST00000182663 604 ntBASIC21.28■■□□□ 1
Trim32Q8CH72 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim32Q8CH72 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim32Q8CH72 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim32Q8CH72 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim32Q8CH72 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim32Q8CH72 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim32Q8CH72 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Trim32Q8CH72 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Trim32Q8CH72 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.27■■□□□ 1
Trim32Q8CH72 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms