Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
ShfQ8CG80 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Gm43137-201ENSMUST00000198052 594 ntBASIC16.91■□□□□ 0.3
ShfQ8CG80 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ShfQ8CG80 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
ShfQ8CG80 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ShfQ8CG80 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ShfQ8CG80 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShfQ8CG80 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShfQ8CG80 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShfQ8CG80 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ShfQ8CG80 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ShfQ8CG80 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ShfQ8CG80 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
ShfQ8CG80 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ShfQ8CG80 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ShfQ8CG80 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.89■□□□□ 0.29
ShfQ8CG80 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ShfQ8CG80 Gm12251-201ENSMUST00000117893 792 ntBASIC16.89■□□□□ 0.29
ShfQ8CG80 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.89■□□□□ 0.29
ShfQ8CG80 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.89■□□□□ 0.29
ShfQ8CG80 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.89■□□□□ 0.29
ShfQ8CG80 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ShfQ8CG80 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ShfQ8CG80 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.88■□□□□ 0.29
ShfQ8CG80 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ShfQ8CG80 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.88■□□□□ 0.29
ShfQ8CG80 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ShfQ8CG80 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.87■□□□□ 0.29
ShfQ8CG80 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
ShfQ8CG80 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.87■□□□□ 0.29
ShfQ8CG80 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ShfQ8CG80 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.87■□□□□ 0.29
ShfQ8CG80 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.87■□□□□ 0.29
ShfQ8CG80 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ShfQ8CG80 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ShfQ8CG80 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ShfQ8CG80 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ShfQ8CG80 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ShfQ8CG80 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ShfQ8CG80 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ShfQ8CG80 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShfQ8CG80 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ShfQ8CG80 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
ShfQ8CG80 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShfQ8CG80 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.86■□□□□ 0.29
ShfQ8CG80 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.86■□□□□ 0.29
ShfQ8CG80 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShfQ8CG80 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ShfQ8CG80 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShfQ8CG80 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ShfQ8CG80 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ShfQ8CG80 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
ShfQ8CG80 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ShfQ8CG80 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.85■□□□□ 0.29
ShfQ8CG80 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ShfQ8CG80 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms