Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cabcoco1Q8CDT7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cabcoco1Q8CDT7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cabcoco1Q8CDT7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.64■□□□□ 0.57
Cabcoco1Q8CDT7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cabcoco1Q8CDT7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cabcoco1Q8CDT7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cabcoco1Q8CDT7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cabcoco1Q8CDT7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cabcoco1Q8CDT7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.6■□□□□ 0.57
Cabcoco1Q8CDT7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cabcoco1Q8CDT7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cabcoco1Q8CDT7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cabcoco1Q8CDT7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms