Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lysmd4Q8CC84 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lysmd4Q8CC84 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.02■□□□□ 0.31
Lysmd4Q8CC84 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lysmd4Q8CC84 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lysmd4Q8CC84 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lysmd4Q8CC84 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lysmd4Q8CC84 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17■□□□□ 0.31
Lysmd4Q8CC84 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lysmd4Q8CC84 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lysmd4Q8CC84 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lysmd4Q8CC84 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Lysmd4Q8CC84 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lysmd4Q8CC84 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Lysmd4Q8CC84 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lysmd4Q8CC84 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Lysmd4Q8CC84 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Gm22238-201ENSMUST00000175222 88 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms