Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rtp1Q8C8C1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 AA386476-201ENSMUST00000098781 1665 ntBASIC21.79■■□□□ 1.08
Rtp1Q8C8C1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Gm15378-201ENSMUST00000121894 207 ntBASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rtp1Q8C8C1 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rtp1Q8C8C1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rtp1Q8C8C1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rtp1Q8C8C1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 Gm10819-201ENSMUST00000099988 561 ntBASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp1Q8C8C1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Gm10231-201ENSMUST00000181584 441 ntBASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Gm10175-202ENSMUST00000208752 441 ntBASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp1Q8C8C1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtp1Q8C8C1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms