Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Uba3Q8C878 Gm26571-201ENSMUST00000181399 666 ntBASIC19.99■□□□□ 0.79
Uba3Q8C878 Gm10033-202ENSMUST00000211874 928 ntBASIC19.99■□□□□ 0.79
Uba3Q8C878 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.99■□□□□ 0.79
Uba3Q8C878 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Uba3Q8C878 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Uba3Q8C878 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Uba3Q8C878 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Uba3Q8C878 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
Uba3Q8C878 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Uba3Q8C878 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Uba3Q8C878 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Uba3Q8C878 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Uba3Q8C878 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.97■□□□□ 0.79
Uba3Q8C878 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Uba3Q8C878 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.97■□□□□ 0.79
Uba3Q8C878 Gm18671-201ENSMUST00000214826 683 ntBASIC19.97■□□□□ 0.79
Uba3Q8C878 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Uba3Q8C878 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Uba3Q8C878 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Uba3Q8C878 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Uba3Q8C878 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Uba3Q8C878 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Uba3Q8C878 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Uba3Q8C878 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.96■□□□□ 0.79
Uba3Q8C878 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Uba3Q8C878 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Uba3Q8C878 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Uba3Q8C878 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Uba3Q8C878 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Uba3Q8C878 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Uba3Q8C878 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uba3Q8C878 Iqck-206ENSMUST00000208658 2891 ntBASIC19.95■□□□□ 0.78
Uba3Q8C878 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.95■□□□□ 0.78
Uba3Q8C878 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uba3Q8C878 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Uba3Q8C878 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uba3Q8C878 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uba3Q8C878 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Uba3Q8C878 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uba3Q8C878 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uba3Q8C878 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uba3Q8C878 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uba3Q8C878 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uba3Q8C878 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Uba3Q8C878 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Uba3Q8C878 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.93■□□□□ 0.78
Uba3Q8C878 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Uba3Q8C878 Gm13146-201ENSMUST00000118508 780 ntBASIC19.93■□□□□ 0.78
Uba3Q8C878 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.93■□□□□ 0.78
Uba3Q8C878 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Uba3Q8C878 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Uba3Q8C878 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Uba3Q8C878 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.92■□□□□ 0.78
Uba3Q8C878 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uba3Q8C878 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Gm42569-201ENSMUST00000200539 472 ntBASIC19.91■□□□□ 0.78
Uba3Q8C878 AV356131-201ENSMUST00000206201 750 ntBASIC19.91■□□□□ 0.78
Uba3Q8C878 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.91■□□□□ 0.78
Uba3Q8C878 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uba3Q8C878 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uba3Q8C878 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.9■□□□□ 0.78
Uba3Q8C878 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Uba3Q8C878 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uba3Q8C878 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.9■□□□□ 0.78
Uba3Q8C878 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Uba3Q8C878 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uba3Q8C878 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Uba3Q8C878 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uba3Q8C878 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Uba3Q8C878 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Uba3Q8C878 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Uba3Q8C878 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Uba3Q8C878 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.89■□□□□ 0.77
Uba3Q8C878 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Uba3Q8C878 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Uba3Q8C878 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Uba3Q8C878 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Uba3Q8C878 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Uba3Q8C878 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms