Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Gm10231-201ENSMUST00000181584 441 ntBASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Gm10175-202ENSMUST00000208752 441 ntBASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cfap54Q8C6S9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cfap54Q8C6S9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap54Q8C6S9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.37■□□□□ 0.53
Cfap54Q8C6S9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap54Q8C6S9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap54Q8C6S9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cfap54Q8C6S9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap54Q8C6S9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap54Q8C6S9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap54Q8C6S9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Cfap54Q8C6S9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.34■□□□□ 0.53
Cfap54Q8C6S9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap54Q8C6S9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.33■□□□□ 0.53
Cfap54Q8C6S9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap54Q8C6S9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap54Q8C6S9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap54Q8C6S9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap54Q8C6S9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap54Q8C6S9 Gm15378-201ENSMUST00000121894 207 ntBASIC18.33■□□□□ 0.52
Cfap54Q8C6S9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.33■□□□□ 0.52
Cfap54Q8C6S9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap54Q8C6S9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms