Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp20Q8C6M1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp20Q8C6M1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp20Q8C6M1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Usp20Q8C6M1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Usp20Q8C6M1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp20Q8C6M1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp20Q8C6M1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp20Q8C6M1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp20Q8C6M1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp20Q8C6M1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.97■□□□□ 0.95
Usp20Q8C6M1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp20Q8C6M1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp20Q8C6M1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Usp20Q8C6M1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp20Q8C6M1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Usp20Q8C6M1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp20Q8C6M1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp20Q8C6M1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp20Q8C6M1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Usp20Q8C6M1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp20Q8C6M1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp20Q8C6M1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Usp20Q8C6M1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp20Q8C6M1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Usp20Q8C6M1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp20Q8C6M1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Usp20Q8C6M1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Gm20049-201ENSMUST00000219950 730 ntBASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.92■□□□□ 0.94
Usp20Q8C6M1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.92■□□□□ 0.94
Usp20Q8C6M1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Gm22240-201ENSMUST00000175225 82 ntBASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Gm20760-201ENSMUST00000179197 648 ntBASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp20Q8C6M1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp20Q8C6M1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms