Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Brat1Q8C3R1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Brat1Q8C3R1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Gm6420-201ENSMUST00000193885 723 ntBASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brat1Q8C3R1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brat1Q8C3R1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brat1Q8C3R1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Nespas-201ENSMUST00000143738 1083 ntBASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brat1Q8C3R1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brat1Q8C3R1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms