Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rft1Q8C3B8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rft1Q8C3B8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Rft1Q8C3B8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rft1Q8C3B8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rft1Q8C3B8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rft1Q8C3B8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rft1Q8C3B8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Mir6236-201ENSMUST00000184437 123 ntBASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rft1Q8C3B8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rft1Q8C3B8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rft1Q8C3B8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rft1Q8C3B8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rft1Q8C3B8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms