Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chd9Q8BYH8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd9Q8BYH8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Gm38205-201ENSMUST00000192243 258 ntBASIC15.08■□□□□ 0.01
Chd9Q8BYH8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd9Q8BYH8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chd9Q8BYH8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd9Q8BYH8 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.08■□□□□ 0
Chd9Q8BYH8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd9Q8BYH8 AA414768-201ENSMUST00000121924 1257 ntBASIC15.07■□□□□ 0
Chd9Q8BYH8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.07■□□□□ 0
Chd9Q8BYH8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chd9Q8BYH8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.07■□□□□ 0
Chd9Q8BYH8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.07■□□□□ 0
Chd9Q8BYH8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.07■□□□□ 0
Chd9Q8BYH8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Chd9Q8BYH8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chd9Q8BYH8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.06■□□□□ 0
Chd9Q8BYH8 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.06■□□□□ 0
Chd9Q8BYH8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chd9Q8BYH8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.06■□□□□ 0
Chd9Q8BYH8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.06■□□□□ 0
Chd9Q8BYH8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd9Q8BYH8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.06■□□□□ 0
Chd9Q8BYH8 Gm18666-201ENSMUST00000190039 958 ntBASIC15.06■□□□□ 0
Chd9Q8BYH8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chd9Q8BYH8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd9Q8BYH8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Chd9Q8BYH8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd9Q8BYH8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chd9Q8BYH8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chd9Q8BYH8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.05■□□□□ 0
Chd9Q8BYH8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chd9Q8BYH8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chd9Q8BYH8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chd9Q8BYH8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd9Q8BYH8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd9Q8BYH8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chd9Q8BYH8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chd9Q8BYH8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.05■□□□□ -0
Chd9Q8BYH8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Chd9Q8BYH8 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.04■□□□□ -0
Chd9Q8BYH8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.04■□□□□ -0
Chd9Q8BYH8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd9Q8BYH8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd9Q8BYH8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.04■□□□□ -0
Chd9Q8BYH8 Gm13559-201ENSMUST00000120476 863 ntBASIC15.04■□□□□ -0
Chd9Q8BYH8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd9Q8BYH8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd9Q8BYH8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.03■□□□□ -0
Chd9Q8BYH8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd9Q8BYH8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms