Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smco3Q8BQM7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smco3Q8BQM7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smco3Q8BQM7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Mir6538-201ENSMUST00000183713 110 ntBASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smco3Q8BQM7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.59■□□□□ 0.09
Smco3Q8BQM7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smco3Q8BQM7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smco3Q8BQM7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms