Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdhr3Q8BL00 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cdhr3Q8BL00 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cdhr3Q8BL00 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cdhr3Q8BL00 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cdhr3Q8BL00 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cdhr3Q8BL00 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Spcs1-204ENSMUST00000226782 949 ntBASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdhr3Q8BL00 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms