Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Depdc1bQ8BH88 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Depdc1bQ8BH88 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.55■□□□□ 0.88
Depdc1bQ8BH88 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1bQ8BH88 Gm26571-201ENSMUST00000181399 666 ntBASIC20.55■□□□□ 0.88
Depdc1bQ8BH88 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1bQ8BH88 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.55■□□□□ 0.88
Depdc1bQ8BH88 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1bQ8BH88 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Gm27405-201ENSMUST00000184201 112 ntBASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.54■□□□□ 0.88
Depdc1bQ8BH88 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Gm10849-201ENSMUST00000100397 618 ntBASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1bQ8BH88 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Depdc1bQ8BH88 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.52■□□□□ 0.88
Depdc1bQ8BH88 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Depdc1bQ8BH88 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Depdc1bQ8BH88 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Depdc1bQ8BH88 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Depdc1bQ8BH88 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Depdc1bQ8BH88 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Depdc1bQ8BH88 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Depdc1bQ8BH88 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Depdc1bQ8BH88 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1bQ8BH88 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1bQ8BH88 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Gm18671-201ENSMUST00000214826 683 ntBASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1bQ8BH88 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Depdc1bQ8BH88 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms