Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smndc1Q8BGT7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.31■□□□□ 0.52
Smndc1Q8BGT7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Gm12922-201ENSMUST00000120626 809 ntBASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smndc1Q8BGT7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smndc1Q8BGT7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smndc1Q8BGT7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smndc1Q8BGT7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smndc1Q8BGT7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smndc1Q8BGT7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Gm21956-201ENSMUST00000179946 522 ntBASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smndc1Q8BGT7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms