Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npas4Q8BGD7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npas4Q8BGD7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Npas4Q8BGD7 Gm44549-201ENSMUST00000208351 577 ntBASIC20.08■□□□□ 0.81
Npas4Q8BGD7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Npas4Q8BGD7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Npas4Q8BGD7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Npas4Q8BGD7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Npas4Q8BGD7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Npas4Q8BGD7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Npas4Q8BGD7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npas4Q8BGD7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Npas4Q8BGD7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Gm6576-201ENSMUST00000169678 883 ntBASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.04■□□□□ 0.8
Npas4Q8BGD7 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Npas4Q8BGD7 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npas4Q8BGD7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Gm18666-201ENSMUST00000190039 958 ntBASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Npas4Q8BGD7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Npas4Q8BGD7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Npas4Q8BGD7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Npas4Q8BGD7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Npas4Q8BGD7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms