Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc116Q80X53 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc116Q80X53 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc116Q80X53 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc116Q80X53 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc116Q80X53 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc116Q80X53 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc116Q80X53 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc116Q80X53 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc116Q80X53 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc116Q80X53 Gm27801-201ENSMUST00000184174 223 ntBASIC18.58■□□□□ 0.56
Ccdc116Q80X53 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc116Q80X53 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc116Q80X53 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc116Q80X53 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc116Q80X53 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc116Q80X53 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc116Q80X53 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc116Q80X53 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Gm7860-201ENSMUST00000121190 879 ntBASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc116Q80X53 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Gm26833-201ENSMUST00000180899 440 ntBASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc116Q80X53 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc116Q80X53 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc116Q80X53 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.52■□□□□ 0.55
Ccdc116Q80X53 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc116Q80X53 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc116Q80X53 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc116Q80X53 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc116Q80X53 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms