Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnrc18Q80WC3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Gm6659-201ENSMUST00000174752 547 ntBASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnrc18Q80WC3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tnrc18Q80WC3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc18Q80WC3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc18Q80WC3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.18■□□□□ 0.66
Tnrc18Q80WC3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.18■□□□□ 0.66
Tnrc18Q80WC3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Tnrc18Q80WC3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnrc18Q80WC3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Gm5417-201ENSMUST00000079706 384 ntBASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnrc18Q80WC3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnrc18Q80WC3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Gm10517-202ENSMUST00000192970 758 ntBASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.15■□□□□ 0.66
Tnrc18Q80WC3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnrc18Q80WC3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnrc18Q80WC3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Tnrc18Q80WC3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Gm13158-201ENSMUST00000122007 736 ntBASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tnrc18Q80WC3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Tnrc18Q80WC3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tnrc18Q80WC3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.13■□□□□ 0.65
Tnrc18Q80WC3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tnrc18Q80WC3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.13■□□□□ 0.65
Tnrc18Q80WC3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Tnrc18Q80WC3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnrc18Q80WC3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnrc18Q80WC3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms