Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 Gm8495-201ENSMUST00000188740 694 ntBASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf139Q7TMV1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 Gm18671-201ENSMUST00000214826 683 ntBASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf139Q7TMV1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf139Q7TMV1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf139Q7TMV1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf139Q7TMV1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Rnf139Q7TMV1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf139Q7TMV1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf139Q7TMV1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf139Q7TMV1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf139Q7TMV1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf139Q7TMV1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf139Q7TMV1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf139Q7TMV1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf139Q7TMV1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf139Q7TMV1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf139Q7TMV1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf139Q7TMV1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rnf139Q7TMV1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms