Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.93■□□□□ 0.94
Herc4Q6PAV2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Herc4Q6PAV2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Gm38205-201ENSMUST00000192243 258 ntBASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Herc4Q6PAV2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Herc4Q6PAV2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.9■□□□□ 0.94
Herc4Q6PAV2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.9■□□□□ 0.94
Herc4Q6PAV2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Herc4Q6PAV2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Herc4Q6PAV2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.88■□□□□ 0.93
Herc4Q6PAV2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Herc4Q6PAV2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Herc4Q6PAV2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Herc4Q6PAV2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms