Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pds5aQ6A026 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pds5aQ6A026 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pds5aQ6A026 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pds5aQ6A026 Gm37179-201ENSMUST00000194862 823 ntBASIC20.46■□□□□ 0.87
Pds5aQ6A026 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.46■□□□□ 0.87
Pds5aQ6A026 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pds5aQ6A026 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pds5aQ6A026 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.45■□□□□ 0.86
Pds5aQ6A026 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pds5aQ6A026 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pds5aQ6A026 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Pds5aQ6A026 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pds5aQ6A026 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.44■□□□□ 0.86
Pds5aQ6A026 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pds5aQ6A026 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pds5aQ6A026 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pds5aQ6A026 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pds5aQ6A026 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pds5aQ6A026 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Pds5aQ6A026 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.4■□□□□ 0.86
Pds5aQ6A026 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pds5aQ6A026 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pds5aQ6A026 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Gm6420-201ENSMUST00000193885 723 ntBASIC20.39■□□□□ 0.85
Pds5aQ6A026 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.39■□□□□ 0.85
Pds5aQ6A026 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pds5aQ6A026 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pds5aQ6A026 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pds5aQ6A026 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pds5aQ6A026 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pds5aQ6A026 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pds5aQ6A026 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pds5aQ6A026 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms