Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.17■□□□□ 0.5
Sdc3Q64519 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sdc3Q64519 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.17■□□□□ 0.5
Sdc3Q64519 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
Sdc3Q64519 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.16■□□□□ 0.5
Sdc3Q64519 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc3Q64519 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.16■□□□□ 0.5
Sdc3Q64519 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.16■□□□□ 0.5
Sdc3Q64519 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc3Q64519 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc3Q64519 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.16■□□□□ 0.5
Sdc3Q64519 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc3Q64519 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sdc3Q64519 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Sdc3Q64519 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.15■□□□□ 0.5
Sdc3Q64519 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.15■□□□□ 0.5
Sdc3Q64519 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.15■□□□□ 0.5
Sdc3Q64519 Gm7514-201ENSMUST00000209475 934 ntBASIC18.15■□□□□ 0.5
Sdc3Q64519 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc3Q64519 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sdc3Q64519 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sdc3Q64519 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sdc3Q64519 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sdc3Q64519 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.14■□□□□ 0.49
Sdc3Q64519 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.14■□□□□ 0.49
Sdc3Q64519 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.14■□□□□ 0.49
Sdc3Q64519 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc3Q64519 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sdc3Q64519 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Sdc3Q64519 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sdc3Q64519 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.13■□□□□ 0.49
Sdc3Q64519 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.13■□□□□ 0.49
Sdc3Q64519 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc3Q64519 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sdc3Q64519 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sdc3Q64519 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.12■□□□□ 0.49
Sdc3Q64519 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc3Q64519 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sdc3Q64519 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc3Q64519 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sdc3Q64519 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Sdc3Q64519 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc3Q64519 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc3Q64519 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.11■□□□□ 0.49
Sdc3Q64519 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc3Q64519 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc3Q64519 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sdc3Q64519 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc3Q64519 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc3Q64519 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.1■□□□□ 0.49
Sdc3Q64519 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.1■□□□□ 0.49
Sdc3Q64519 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sdc3Q64519 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc3Q64519 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc3Q64519 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sdc3Q64519 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc3Q64519 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms