Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes3Q61657 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes3Q61657 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes3Q61657 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes3Q61657 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hes3Q61657 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hes3Q61657 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Hes3Q61657 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hes3Q61657 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hes3Q61657 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.33■□□□□ 0.2
Hes3Q61657 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.33■□□□□ 0.2
Hes3Q61657 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hes3Q61657 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Hes3Q61657 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hes3Q61657 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hes3Q61657 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hes3Q61657 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.32■□□□□ 0.2
Hes3Q61657 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.32■□□□□ 0.2
Hes3Q61657 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.32■□□□□ 0.2
Hes3Q61657 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hes3Q61657 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hes3Q61657 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hes3Q61657 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hes3Q61657 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.31■□□□□ 0.2
Hes3Q61657 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Hes3Q61657 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hes3Q61657 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hes3Q61657 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hes3Q61657 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.3■□□□□ 0.2
Hes3Q61657 Spcs1-204ENSMUST00000226782 949 ntBASIC16.3■□□□□ 0.2
Hes3Q61657 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Hes3Q61657 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hes3Q61657 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.3■□□□□ 0.2
Hes3Q61657 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hes3Q61657 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.29■□□□□ 0.2
Hes3Q61657 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.29■□□□□ 0.2
Hes3Q61657 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.29■□□□□ 0.2
Hes3Q61657 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hes3Q61657 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hes3Q61657 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes3Q61657 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes3Q61657 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hes3Q61657 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes3Q61657 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hes3Q61657 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes3Q61657 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hes3Q61657 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms