Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ift88Q61371 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ift88Q61371 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ift88Q61371 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ift88Q61371 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ift88Q61371 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.95■□□□□ 0.94
Ift88Q61371 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Spcs1-204ENSMUST00000226782 949 ntBASIC20.95■□□□□ 0.94
Ift88Q61371 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ift88Q61371 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Ift88Q61371 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.94■□□□□ 0.94
Ift88Q61371 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ift88Q61371 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ift88Q61371 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.93■□□□□ 0.94
Ift88Q61371 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ift88Q61371 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.92■□□□□ 0.94
Ift88Q61371 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.92■□□□□ 0.94
Ift88Q61371 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ift88Q61371 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ift88Q61371 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ift88Q61371 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ift88Q61371 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ift88Q61371 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.91■□□□□ 0.94
Ift88Q61371 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.91■□□□□ 0.94
Ift88Q61371 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.91■□□□□ 0.94
Ift88Q61371 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ift88Q61371 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ift88Q61371 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Ift88Q61371 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.9■□□□□ 0.94
Ift88Q61371 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
Ift88Q61371 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ift88Q61371 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
Ift88Q61371 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.89■□□□□ 0.94
Ift88Q61371 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ift88Q61371 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.89■□□□□ 0.94
Ift88Q61371 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ift88Q61371 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ift88Q61371 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ift88Q61371 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ift88Q61371 Gm43137-201ENSMUST00000198052 594 ntBASIC20.89■□□□□ 0.93
Ift88Q61371 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ift88Q61371 Gm9847-201ENSMUST00000052528 599 ntBASIC20.89■□□□□ 0.93
Ift88Q61371 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ift88Q61371 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ift88Q61371 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms