Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sdf4Q61112 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sdf4Q61112 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sdf4Q61112 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sdf4Q61112 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sdf4Q61112 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sdf4Q61112 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sdf4Q61112 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Sdf4Q61112 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sdf4Q61112 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sdf4Q61112 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.22■□□□□ 0.67
Sdf4Q61112 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sdf4Q61112 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdf4Q61112 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sdf4Q61112 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Sdf4Q61112 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.21■□□□□ 0.67
Sdf4Q61112 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.21■□□□□ 0.67
Sdf4Q61112 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.21■□□□□ 0.67
Sdf4Q61112 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sdf4Q61112 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.21■□□□□ 0.67
Sdf4Q61112 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdf4Q61112 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.2■□□□□ 0.66
Sdf4Q61112 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.2■□□□□ 0.66
Sdf4Q61112 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.2■□□□□ 0.66
Sdf4Q61112 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.2■□□□□ 0.66
Sdf4Q61112 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Gm9988-201ENSMUST00000069786 435 ntBASIC19.2■□□□□ 0.66
Sdf4Q61112 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sdf4Q61112 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdf4Q61112 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdf4Q61112 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdf4Q61112 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Sdf4Q61112 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdf4Q61112 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Sdf4Q61112 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sdf4Q61112 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sdf4Q61112 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdf4Q61112 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sdf4Q61112 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.19■□□□□ 0.66
Sdf4Q61112 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sdf4Q61112 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdf4Q61112 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.18■□□□□ 0.66
Sdf4Q61112 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sdf4Q61112 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sdf4Q61112 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdf4Q61112 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Sdf4Q61112 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Sdf4Q61112 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.18■□□□□ 0.66
Sdf4Q61112 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.18■□□□□ 0.66
Sdf4Q61112 Gm10493-201ENSMUST00000097270 612 ntBASIC19.18■□□□□ 0.66
Sdf4Q61112 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Sdf4Q61112 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdf4Q61112 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.17■□□□□ 0.66
Sdf4Q61112 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sdf4Q61112 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms