Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col12a1Q60847 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col12a1Q60847 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col12a1Q60847 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col12a1Q60847 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Col12a1Q60847 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col12a1Q60847 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.03■□□□□ 0.64
Col12a1Q60847 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
Col12a1Q60847 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col12a1Q60847 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.03■□□□□ 0.64
Col12a1Q60847 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.03■□□□□ 0.64
Col12a1Q60847 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Col12a1Q60847 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.02■□□□□ 0.64
Col12a1Q60847 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Col12a1Q60847 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col12a1Q60847 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col12a1Q60847 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.02■□□□□ 0.63
Col12a1Q60847 Gm7860-201ENSMUST00000121190 879 ntBASIC19.02■□□□□ 0.63
Col12a1Q60847 Gm44549-201ENSMUST00000208351 577 ntBASIC19.02■□□□□ 0.63
Col12a1Q60847 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col12a1Q60847 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Col12a1Q60847 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col12a1Q60847 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Gm17971-201ENSMUST00000190239 806 ntBASIC19.01■□□□□ 0.63
Col12a1Q60847 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col12a1Q60847 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.01■□□□□ 0.63
Col12a1Q60847 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col12a1Q60847 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19■□□□□ 0.63
Col12a1Q60847 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col12a1Q60847 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col12a1Q60847 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19■□□□□ 0.63
Col12a1Q60847 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Col12a1Q60847 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col12a1Q60847 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19■□□□□ 0.63
Col12a1Q60847 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Col12a1Q60847 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col12a1Q60847 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Col12a1Q60847 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col12a1Q60847 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col12a1Q60847 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col12a1Q60847 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col12a1Q60847 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.99■□□□□ 0.63
Col12a1Q60847 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col12a1Q60847 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.99■□□□□ 0.63
Col12a1Q60847 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.99■□□□□ 0.63
Col12a1Q60847 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Col12a1Q60847 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.99■□□□□ 0.63
Col12a1Q60847 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col12a1Q60847 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col12a1Q60847 Gm25925-201ENSMUST00000158314 306 ntBASIC18.98■□□□□ 0.63
Col12a1Q60847 Gm6345-202ENSMUST00000180900 204 ntBASIC18.98■□□□□ 0.63
Col12a1Q60847 Gm21814-202ENSMUST00000203277 873 ntBASIC18.98■□□□□ 0.63
Col12a1Q60847 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Col12a1Q60847 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col12a1Q60847 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col12a1Q60847 Gm7889-201ENSMUST00000185591 958 ntBASIC18.98■□□□□ 0.63
Col12a1Q60847 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col12a1Q60847 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col12a1Q60847 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col12a1Q60847 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.97■□□□□ 0.63
Col12a1Q60847 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.97■□□□□ 0.63
Col12a1Q60847 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col12a1Q60847 Gm23634-201ENSMUST00000175071 91 ntBASIC18.96■□□□□ 0.63
Col12a1Q60847 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Col12a1Q60847 AA386476-201ENSMUST00000098781 1665 ntBASIC18.96■□□□□ 0.63
Col12a1Q60847 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col12a1Q60847 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col12a1Q60847 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col12a1Q60847 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col12a1Q60847 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col12a1Q60847 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms