Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h4Q60641 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h4Q60641 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.06■□□□□ 0.48
Nr1h4Q60641 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nr1h4Q60641 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h4Q60641 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Nr1h4Q60641 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h4Q60641 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nr1h4Q60641 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
Nr1h4Q60641 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nr1h4Q60641 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.04■□□□□ 0.48
Nr1h4Q60641 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h4Q60641 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.04■□□□□ 0.48
Nr1h4Q60641 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h4Q60641 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nr1h4Q60641 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h4Q60641 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.03■□□□□ 0.48
Nr1h4Q60641 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.03■□□□□ 0.48
Nr1h4Q60641 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nr1h4Q60641 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h4Q60641 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.02■□□□□ 0.48
Nr1h4Q60641 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nr1h4Q60641 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h4Q60641 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.02■□□□□ 0.48
Nr1h4Q60641 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h4Q60641 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nr1h4Q60641 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.02■□□□□ 0.48
Nr1h4Q60641 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nr1h4Q60641 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.02■□□□□ 0.48
Nr1h4Q60641 Serp2-204ENSMUST00000228055 705 ntBASIC18.02■□□□□ 0.48
Nr1h4Q60641 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nr1h4Q60641 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h4Q60641 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nr1h4Q60641 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Nr1h4Q60641 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nr1h4Q60641 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nr1h4Q60641 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nr1h4Q60641 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h4Q60641 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h4Q60641 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h4Q60641 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nr1h4Q60641 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nr1h4Q60641 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nr1h4Q60641 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1h4Q60641 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1h4Q60641 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nr1h4Q60641 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1h4Q60641 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1h4Q60641 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nr1h4Q60641 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1h4Q60641 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nr1h4Q60641 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms