Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim38Q5SZ99 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Trim38Q5SZ99 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim38Q5SZ99 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trim38Q5SZ99 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim38Q5SZ99 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim38Q5SZ99 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim38Q5SZ99 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.64■□□□□ 0.73
Trim38Q5SZ99 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trim38Q5SZ99 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim38Q5SZ99 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim38Q5SZ99 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.64■□□□□ 0.73
Trim38Q5SZ99 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim38Q5SZ99 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Gm43060-201ENSMUST00000200621 289 ntBASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim38Q5SZ99 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim38Q5SZ99 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.6■□□□□ 0.73
Trim38Q5SZ99 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim38Q5SZ99 BC021767-201ENSMUST00000126387 1716 ntBASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim38Q5SZ99 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim38Q5SZ99 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim38Q5SZ99 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.58■□□□□ 0.73
Trim38Q5SZ99 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim38Q5SZ99 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms