Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6-2Q5R1I4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.71■□□□□ 0.26
Trav6-2Q5R1I4 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6-2Q5R1I4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav6-2Q5R1I4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6-2Q5R1I4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Gm10812-201ENSMUST00000099864 546 ntBASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6-2Q5R1I4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6-2Q5R1I4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6-2Q5R1I4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
Trav6-2Q5R1I4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms